I would like to share my case and the workaround I found, as my case regarding the quartz option overriding failure via quartz.ts brought me here too. In my case the plugin is explorer and the overridden option is filterFn.
I understand that the @Julian-M ‘s initial issue occurred in recent-notes plugin while mine popped up from explorer. But as I met this issue while searching for a solution using the keywords, quartz.ts option overriding. So there might be someone with the same keywords may need the solution I spotted on discord.
And hopefully this would be a chance for the team to look into the official documentation and the code sample again to make them work under the circumstances we have faced.